Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-548o in COID Lung Bhattacharjee Cluster 5 Table contains all genes in the COID Lung Bhattacharjee cluster number 5. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548o 10196 PRMT3 protein arginine methyltransferase 3 [Source:HGNC Symbol;Acc:30163] zzz999 9687 GREB1 growth regulation by estrogen in breast cancer 1 [Source:HGNC Symbol;Acc:24885] zzz999 10105 PPIF peptidylprolyl isomerase F [Source:HGNC Symbol;Acc:9259] T 3845 KRAS v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog [Source:HGNC Symbol;Acc:6407] P T 11057 ABHD2 abhydrolase domain containing 2 [Source:HGNC Symbol;Acc:18717] T 747 DAGLA diacylglycerol lipase, alpha [Source:HGNC Symbol;Acc:1165] zzz999 23060 ZNF609 zinc finger protein 609 [Source:HGNC Symbol;Acc:29003] zzz999 5585 PKN1 protein kinase N1 [Source:HGNC Symbol;Acc:9405] zzz999 1024 CDK8 cyclin-dependent kinase 8 [Source:HGNC Symbol;Acc:1779] zzz999 3779 KCNMB1 potassium large conductance calcium-activated channel, subfamily M, beta member 1 [Source:HGNC Symbol;Acc:6285] zzz999 5218 CDK14 cyclin-dependent kinase 14 [Source:HGNC Symbol;Acc:8883] P T 5104 SERPINA5 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 [Source:HGNC Symbol;Acc:8723] zzz999 1734 zzz999 zzz999 P T 10873 ME3 malic enzyme 3, NADP(+)-dependent, mitochondrial [Source:HGNC Symbol;Acc:6985] zzz999 9738 zzz999 Centrosomal protein CP110 [Source:UniProtKB/Swiss-Prot;Acc:O43303] P T 23228 PLCL2 phospholipase C-like 2 [Source:HGNC Symbol;Acc:9064] zzz999 2743 GLRB glycine receptor, beta [Source:HGNC Symbol;Acc:4329] T 11187 PKP3 plakophilin 3 [Source:HGNC Symbol;Acc:9025] zzz999 6191 RPS4X ribosomal protein S4, X-linked [Source:HGNC Symbol;Acc:10424] zzz999 51493 C22orf28 chromosome 22 open reading frame 28 [Source:HGNC Symbol;Acc:26935] zzz999 4005 LMO2 LIM domain only 2 (rhombotin-like 1) [Source:HGNC Symbol;Acc:6642] zzz999 55558 PLXNA3 plexin A3 [Source:HGNC Symbol;Acc:9101] zzz999 3897 L1CAM L1 cell adhesion molecule [Source:HGNC Symbol;Acc:6470] zzz999 399665 FAM102A family with sequence similarity 102, member A [Source:HGNC Symbol;Acc:31419] zzz999 4843 NOS2 nitric oxide synthase 2, inducible [Source:HGNC Symbol;Acc:7873] zzz999 22871 NLGN1 neuroligin 1 [Source:HGNC Symbol;Acc:14291] T 9221 NOLC1 nucleolar and coiled-body phosphoprotein 1 [Source:HGNC Symbol;Acc:15608] T 10522 DEAF1 deformed epidermal autoregulatory factor 1 (Drosophila) [Source:HGNC Symbol;Acc:14677] zzz999 9804 TOMM20 translocase of outer mitochondrial membrane 20 homolog (yeast) [Source:HGNC Symbol;Acc:20947] P T 6629 SNRPB2 small nuclear ribonucleoprotein polypeptide B [Source:HGNC Symbol;Acc:11155] T 5327 PLAT plasminogen activator, tissue [Source:HGNC Symbol;Acc:9051] zzz999 58 ACTA1 actin, alpha 1, skeletal muscle [Source:HGNC Symbol;Acc:129] zzz999 3400 ID4 inhibitor of DNA binding 4, dominant negative helix-loop-helix protein [Source:HGNC Symbol;Acc:5363] T 2036 EPB41L1 erythrocyte membrane protein band 4.1-like 1 [Source:HGNC Symbol;Acc:3378] zzz999 6675 UAP1 UDP-N-acteylglucosamine pyrophosphorylase 1 [Source:HGNC Symbol;Acc:12457] T 6809 STX3 syntaxin 3 [Source:HGNC Symbol;Acc:11438] zzz999 6894 TARBP1 TAR (HIV-1) RNA binding protein 1 [Source:HGNC Symbol;Acc:11568] zzz999 5550 PREP prolyl endopeptidase [Source:HGNC Symbol;Acc:9358] zzz999 23274 CLEC16A C-type lectin domain family 16, member A [Source:HGNC Symbol;Acc:29013] zzz999 10625 IVNS1ABP influenza virus NS1A binding protein [Source:HGNC Symbol;Acc:16951] T 477 ATP1A2 ATPase, Na+/K+ transporting, alpha 2 polypeptide [Source:HGNC Symbol;Acc:800] zzz999 23389 MED13L mediator complex subunit 13-like [Source:HGNC Symbol;Acc:22962] zzz999 23281 MTUS2 microtubule associated tumor suppressor candidate 2 [Source:HGNC Symbol;Acc:20595] T 3034 HAL histidine ammonia-lyase [Source:HGNC Symbol;Acc:4806] zzz999 5129 CDK18 cyclin-dependent kinase 18 [Source:HGNC Symbol;Acc:8751] zzz999 26095 PTPN20A protein tyrosine phosphatase, non-receptor type 20A [Source:HGNC Symbol;Acc:23422] zzz999 28513 CDH19 cadherin 19, type 2 [Source:HGNC Symbol;Acc:1758] T 7327 UBE2G2 ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:HGNC Symbol;Acc:12483] zzz999 2173 FABP7 fatty acid binding protein 7, brain [Source:HGNC Symbol;Acc:3562] T 28232 SLCO3A1 solute carrier organic anion transporter family, member 3A1 [Source:HGNC Symbol;Acc:10952] zzz999 26035 GLCE glucuronic acid epimerase [Source:HGNC Symbol;Acc:17855] zzz999 158471 PRUNE2 prune homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:25209] T 5443 POMC proopiomelanocortin [Source:HGNC Symbol;Acc:9201] zzz999 5334 PLCL1 phospholipase C-like 1 [Source:HGNC Symbol;Acc:9063] zzz999 23026 MYO16 myosin XVI [Source:HGNC Symbol;Acc:29822] zzz999 26045 LRRTM2 leucine rich repeat transmembrane neuronal 2 [Source:HGNC Symbol;Acc:19409] zzz999 64714 PDIA2 protein disulfide isomerase family A, member 2 [Source:HGNC Symbol;Acc:14180] zzz999 23040 MYT1L myelin transcription factor 1-like [Source:HGNC Symbol;Acc:7623] P T 23261 CAMTA1 calmodulin binding transcription activator 1 [Source:HGNC Symbol;Acc:18806] P 5354 PLP1 proteolipid protein 1 [Source:HGNC Symbol;Acc:9086] T 1407 CRY1 cryptochrome 1 (photolyase-like) [Source:HGNC Symbol;Acc:2384] P T 3736 KCNA1 potassium voltage-gated channel, shaker-related subfamily, member 1 (episodic ataxia with myokymia) [Source:HGNC Symbol;Acc:6218] zzz999

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